> For the complete documentation index, see [llms.txt](https://zhonglab.gitbook.io/3dgenome/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://zhonglab.gitbook.io/3dgenome/chapter2-computational-analysis.md).

# Chap3 Computational analysis

## Computational analysis

![](https://2185211125-files.gitbook.io/~/files/v0/b/gitbook-legacy-files/o/assets%2F-LHa3gDECHFHyklI99-v%2F-LHcDDx8btLmQrVVCjFD%2F-LHcEQw5qPKNrMkrOBB6%2Fcomppipe.png?alt=media\&token=d06ccee0-2967-4c1d-ad9d-caf6c94dbd04)

Figure 1: Data analysis workflow comparison between higher-order data and primary-order data. The white box indicates common steps in the middle, and special analysis for different types are listed on two sides.